Main Information and Access
7 tool(s) have been excluded, which are:
- FuzPred (2020) because the same developers created “FuzDrop” a tool specifically intended for LLPS.
- MaGS (2020) because it relies heavily on experimental data, which limits its use when such data is unavailable. To address this, the same developers created MaGSeq, a follow-up tool designed to predict LLPS involvement without depending on experimental inputs. MaGS predicts protein localization into cellular condensates using a GLM trained on experimentally derived features, including protein abundance, intrinsic disorder, phosphorylation, RNA interaction, PScore, CamSol, and amino acid composition. Web server & Repository.
- PASTA+PScore (2022) because it is not clear.
- LLPS-Wise (2022) because it is a pre-print. Algorithm based on NN to map protein-protein interaction network with LLPS data. Repository
- PredLLPS-PSSM (2023) because the same developers created “Opt_PredLLPS” a newer, functional and optimized tool for LLPS predictions compared to this version.
- FINCHES (2024) because it is a pre-print. FINCHES applies coarse-grained force field parameters and a mean-field model to approximate homo- and heterotypic interactions, including phase diagrams. Web server & Repository.
- PhaSeek (2025) because it is a pre-print.